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- rs566676343[chr19:5338524]
Enhancers that have rs566676343[chr19:5338524]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
5338459 |
5338816 |
vista28388 |
|
|
Transcript factors that have rs566676343[chr19:5338524]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
5337703
|
5339208
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375041
|
|
|
chr19
|
5337796
|
5339271
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375042
|
|
|
chr19
|
5337917
|
5339393
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375043
|
|
|
chr19
|
5337918
|
5339304
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375044
|
|
|
chr19
|
5337953
|
5341628
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108375046
|
|
|
chr19
|
5337953
|
5341628
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108375047
|
|
|
chr19
|
5337974
|
5341515
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375048
|
|
|
chr19
|
5337974
|
5341515
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375049
|
|
|
chr19
|
5338055
|
5339226
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375050
|
|
|
chr19
|
5338089
|
5341363
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375051
|
|
|
chr19
|
5338089
|
5341363
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375052
|
|
|
chr19
|
5338123
|
5339554
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375053
|
|
|
chr19
|
5338123
|
5339554
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375054
|
|
|
chr19
|
5338354
|
5341561
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375055
|
|
|
chr19
|
5338354
|
5341561
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108375056
|
|
|
chr19
|
5338435
|
5339126
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108375057
|
|
|
chr19
|
5338472
|
5339351
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108375058
|
|
|
chr19
|
5338509
|
5338530
|
ZNF263
|
JASPAR
|
yes
|
|
70792136
|
|
|
chr19
|
5338511
|
5339459
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108375059
|
|
|
chr19
|
5338513
|
5338527
|
PLAG1
|
JASPAR
|
yes
|
|
70792137
|
|
|
chr19
|
5338513
|
5338534
|
ZNF263
|
JASPAR
|
yes
|
|
70792138
|
|
|
chr19
|
5338514
|
5338531
|
RXRA
|
JASPAR
|
yes
|
|
70792139
|
|
|
chr19
|
5338514
|
5338535
|
ZNF263
|
JASPAR
|
yes
|
|
70792140
|
|
|
chr19
|
5338515
|
5338530
|
ZIC3
|
JASPAR
|
yes
|
|
70792142
|
|
|
chr19
|
5338515
|
5338530
|
ZIC4
|
JASPAR
|
yes
|
|
70792143
|
|
|
chr19
|
5338515
|
5338535
|
RREB1
|
JASPAR
|
yes
|
|
70792144
|
|
|
chr19
|
5338516
|
5338530
|
ZIC1
|
JASPAR
|
yes
|
|
70792145
|
|
|
chr19
|
5338520
|
5338530
|
SP1
|
JASPAR
|
yes
|
|
70792146
|
|
|
chr19
|
5338520
|
5338530
|
ZNF740
|
JASPAR
|
yes
|
|
70792147
|
|
|
chr19
|
5338522
|
5338536
|
PLAG1
|
JASPAR
|
yes
|
|
70792148
|
|
Genes associated with rs566676343[chr19:5338524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |