EnhancerDB
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  3. rs566717072[chr17:53522823]
Enhancers that have rs566717072[chr17:53522823]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs566717072[chr17:53522823]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53522814 53522824 PAX3 JASPAR yes 54851785
chr17 53522814 53522824 PAX7 JASPAR yes 54851786
chr17 53522816 53522825 VENTX JASPAR yes 54851787
chr17 53522820 53522832 MEF2D JASPAR yes 54851788
chr17 53522822 53522826 YY1 TRANSFAC yes 54851789
Genes associated with rs566717072[chr17:53522823], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More