EnhancerDB
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  3. rs56707671[chr17:80243440]
Enhancers that have rs56707671[chr17:80243440]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs56707671[chr17:80243440]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80242997 80243730 TCF7L2 GTRD no Colon (HCT116) 21798559
chr17 80243421 80243440 REST JASPAR yes 56357745
chr17 80243437 80244630 ZNF143 GTRD no Epithelial (MCF-7) 21798561
chr17 80243440 80243455 NR2C2 JASPAR yes 56357747
Genes associated with rs56707671[chr17:80243440], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More