EnhancerDB
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  3. rs568002972[chr1:27444319]
Enhancers that have rs568002972[chr1:27444319]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27433689 27453155 enh170
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs568002972[chr1:27444319]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27444318 27444326 HOXA5 JASPAR yes 27678233
chr1 27444318 27444328 POU6F2 JASPAR yes 27678234
chr1 27444319 27444329 EMX1 JASPAR yes 27678235
chr1 27444319 27444329 EMX2 JASPAR yes 27678236
chr1 27444319 27444329 EN2 JASPAR yes 27678237
chr1 27444319 27444329 ESX1 JASPAR yes 27678238
chr1 27444319 27444329 GBX1 JASPAR yes 27678239
chr1 27444319 27444329 GBX2 JASPAR yes 27678240
chr1 27444319 27444329 GSX1 JASPAR yes 27678241
chr1 27444319 27444329 GSX2 JASPAR yes 27678242
chr1 27444319 27444329 HESX1 JASPAR yes 27678243
chr1 27444319 27444329 HOXA2 JASPAR yes 27678244
chr1 27444319 27444329 HOXB2 JASPAR yes 27678245
chr1 27444319 27444329 HOXB3 JASPAR yes 27678246
chr1 27444319 27444329 LBX2 JASPAR yes 27678247
chr1 27444319 27444329 LHX2 JASPAR yes 27678248
chr1 27444319 27444329 LHX6 JASPAR yes 27678249
chr1 27444319 27444329 MEOX1 JASPAR yes 27678250
chr1 27444319 27444329 MEOX2 JASPAR yes 27678251
chr1 27444319 27444329 MIXL1 JASPAR yes 27678252
chr1 27444319 27444329 MNX1 JASPAR yes 27678253
chr1 27444319 27444329 NOTO JASPAR yes 27678254
chr1 27444319 27444329 POU6F1 JASPAR yes 27678255
chr1 27444319 27444329 RAX JASPAR yes 27678256
Genes associated with rs568002972[chr1:27444319], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More