EnhancerDB
  1. Home
  2. SNP
  3. rs568408772[chr17:39935007]
Enhancers that have rs568408772[chr17:39935007]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs568408772[chr17:39935007]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39934994 39935009 MEF2C JASPAR yes 54275282
chr17 39934995 39935010 MEF2A JASPAR yes 54275283
chr17 39934996 39935008 MEF2A JASPAR yes 54275284
chr17 39934996 39935008 MEF2B JASPAR yes 54275285
chr17 39934996 39935008 MEF2D JASPAR yes 54275286
chr17 39934997 39935007 MEF2A JASPAR yes 54275287
chr17 39935004 39935008 TEAD2 TRANSFAC yes 54275288
chr17 39935004 39935009 TBP TRANSFAC yes 54275289
chr17 39935004 39935010 TFIID TRANSFAC yes 54275290
chr17 39935004 39935019 HNF1A JASPAR yes 54275291
chr17 39935006 39935012 TBP TRANSFAC yes 54275292
Genes associated with rs568408772[chr17:39935007], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More