EnhancerDB
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  3. rs568522888[chr2:238805234]
Enhancers that have rs568522888[chr2:238805234]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238789822 238819991 enh19403
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 238803368 238807597 vista1021
VISTA
Transcript factors that have rs568522888[chr2:238805234]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238805224 238805236 TFAP2A JASPAR yes 68303771
chr2 238805224 238805236 TFAP2B JASPAR yes 68303772
chr2 238805224 238805236 TFAP2C JASPAR yes 68303773
chr2 238805224 238805236 TFAP2A JASPAR yes 82144222
chr2 238805224 238805236 TFAP2B JASPAR yes 82144223
chr2 238805224 238805236 TFAP2C JASPAR yes 82144224
chr2 238805224 238805239 TFAP2A JASPAR yes 68303774
chr2 238805224 238805239 TFAP2A JASPAR yes 82144225
chr2 238805228 238805238 SREBF1 JASPAR yes 68303775
chr2 238805228 238805238 SREBF2 JASPAR yes 68303776
chr2 238805228 238805238 SREBF1 JASPAR yes 82144226
chr2 238805228 238805238 SREBF2 JASPAR yes 82144227
chr2 238805233 238805243 SREBF1 JASPAR yes 68303777
chr2 238805233 238805243 SREBF1 JASPAR yes 82144228
Genes associated with rs568522888[chr2:238805234], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More