EnhancerDB
  1. Home
  2. SNP
  3. rs568569923[chr1:172875325]
Enhancers that have rs568569923[chr1:172875325]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs568569923[chr1:172875325]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172874533 172875537 ZBTB33 GTRD no Brain (SK-N-SH) 107846240
chr1 172874699 172875463 ZBTB33 GTRD no Brain (SK-N-SH) 107846241
chr1 172874719 172875598 ZNF274 GTRD no Blood (GM12878) 107846242
chr1 172874730 172875552 ZNF274 GTRD no Blood (GM12878) 107846243
chr1 172874730 172875564 ZNF274 GTRD no Blood (GM12878) 107846244
chr1 172874754 172875561 ZNF274 GTRD no Blood (GM12878) 107846245
chr1 172875314 172875335 IRF1 JASPAR yes 33164092
chr1 172875318 172875333 PRDM1 JASPAR yes 33164094
chr1 172875319 172875340 ZNF263 JASPAR yes 33164095
Genes associated with rs568569923[chr1:172875325], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More