EnhancerDB
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  3. rs568835477[chr17:76932625]
Enhancers that have rs568835477[chr17:76932625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs568835477[chr17:76932625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931463 76933661 TCF7L2 GTRD no Colon (HCT116) 21795410
chr17 76932171 76933233 TCF7L2 GTRD no Colon (HCT116) 21795421
chr17 76932268 76933584 TCF7L2 GTRD no Colon (HCT116) 21795424
chr17 76932275 76933649 TCF7L2 GTRD no Colon (HCT116) 21795425
chr17 76932317 76933286 TCF7L2 GTRD no Colon (HCT116) 21795426
chr17 76932368 76932987 TCF7L2 GTRD no Colon (HCT116) 21795427
chr17 76932398 76932939 TCF7L2 GTRD no Colon (HCT116) 21795428
chr17 76932485 76932927 ZNF143 GTRD no Epithelial (MCF-7) 21795429
chr17 76932607 76932627 ESR1 JASPAR yes 56190539
chr17 76932610 76932628 ESR1 JASPAR yes 56190540
chr17 76932610 76932628 ESR2 JASPAR yes 56190541
chr17 76932612 76932627 ESR2 JASPAR yes 56190542
chr17 76932612 76932632 ESR1 JASPAR yes 56190543
chr17 76932625 76932637 YY1 JASPAR yes 56190544
Genes associated with rs568835477[chr17:76932625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More