EnhancerDB
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  3. rs568960357[chr19:1898997]
Enhancers that have rs568960357[chr19:1898997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1893405 1900210 enh17845
Bone Marrow (K562) Liver (HepG2) Blood (T-cell) Esophagus Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs568960357[chr19:1898997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1898642 1899120 TCF7L2 GTRD no Colon (HCT116) 21834025
chr19 1898989 1898998 HIC2 JASPAR yes 112037006
chr19 1898993 1899003 ID4 JASPAR yes 112037008
chr19 1898993 1899003 TCF3 JASPAR yes 112037009
chr19 1898993 1899003 TCF4 JASPAR yes 112037010
chr19 1898994 1899003 SNAI2 JASPAR yes 112037011
chr19 1898995 1899000 USF2 TRANSFAC yes 112037012
Genes associated with rs568960357[chr19:1898997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More