EnhancerDB
  1. Home
  2. SNP
  3. rs56899563[chr2:225396152]
Enhancers that have rs56899563[chr2:225396152]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 225380709 225396539 enh6176
Skin (Keratinocyte) Prostate (PC-3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Liver Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Epithelial (MCF-7)
Transcript factors that have rs56899563[chr2:225396152]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 225396143 225396158 MEF2A JASPAR yes 81338785
chr2 225396147 225396162 MEF2C JASPAR yes 81338787
chr2 225396151 225396157 TBP TRANSFAC yes 81338788
chr2 225396152 225396167 STAT2 JASPAR yes 81338789
Genes associated with rs56899563[chr2:225396152], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More