EnhancerDB
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  3. rs569098196[chr1:230222325]
Enhancers that have rs569098196[chr1:230222325]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs569098196[chr1:230222325]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230222311 230222327 SOX8 JASPAR yes 36019939
chr1 230222317 230222338 IRF1 JASPAR yes 36019940
chr1 230222319 230222334 STAT2 JASPAR yes 36019941
chr1 230222320 230222334 STAT1 JASPAR yes 36019942
Genes associated with rs569098196[chr1:230222325], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More