EnhancerDB
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  3. rs56952394[chr1:23083525]
Enhancers that have rs56952394[chr1:23083525]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23070013 23090842 enh119
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs56952394[chr1:23083525]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23083510 23083528 IRF2 JASPAR yes 27389254
chr1 23083511 23083532 IRF1 JASPAR yes 27389255
chr1 23083513 23083528 PRDM1 JASPAR yes 27389256
chr1 23083513 23083528 STAT2 JASPAR yes 27389257
chr1 23083515 23083529 IRF7 JASPAR yes 27389258
chr1 23083515 23083529 IRF8 JASPAR yes 27389259
chr1 23083515 23083530 IRF9 JASPAR yes 27389260
chr1 23083524 23083536 PKNOX2 JASPAR yes 27389261
Genes associated with rs56952394[chr1:23083525], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More