EnhancerDB
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  3. rs569554930[chr17:46563661]
Enhancers that have rs569554930[chr17:46563661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs569554930[chr17:46563661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46563647 46563662 FOXP1 JASPAR yes 54588730
chr17 46563647 46563668 IRF1 JASPAR yes 54588731
chr17 46563650 46563665 FOXP1 JASPAR yes 54588732
chr17 46563651 46563666 STAT2 JASPAR yes 54588733
chr17 46563652 46563667 FOXP1 JASPAR yes 54588734
chr17 46563652 46563673 IRF1 JASPAR yes 54588735
chr17 46563653 46563674 IRF1 JASPAR yes 54588736
chr17 46563654 46563666 FOXC2 JASPAR yes 54588737
chr17 46563654 46563674 RREB1 JASPAR yes 54588738
chr17 46563655 46563666 FOXP2 JASPAR yes 54588739
Genes associated with rs569554930[chr17:46563661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More