EnhancerDB
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  3. rs569680316[chr17:39834508]
Enhancers that have rs569680316[chr17:39834508]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs569680316[chr17:39834508]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39834001 39835444 POLR2A UCSC Txn Factor no Conserved 108259514
chr17 39834441 39835281 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758240
chr17 39834441 39835281 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259515
chr17 39834463 39835435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21758241
chr17 39834463 39835435 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259516
chr17 39834466 39835199 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758242
chr17 39834466 39835199 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259517
chr17 39834489 39834510 IRF1 JASPAR yes 54272380
chr17 39834490 39834511 IRF1 JASPAR yes 54272382
chr17 39834491 39834512 IRF1 JASPAR yes 54272384
chr17 39834492 39834513 IRF1 JASPAR yes 54272386
chr17 39834493 39834508 FOXP1 JASPAR yes 54272387
chr17 39834493 39834514 IRF1 JASPAR yes 54272388
chr17 39834494 39834509 FOXP1 JASPAR yes 54272389
chr17 39834494 39834515 IRF1 JASPAR yes 54272390
chr17 39834495 39834510 FOXP1 JASPAR yes 54272391
chr17 39834495 39834516 IRF1 JASPAR yes 54272392
chr17 39834496 39834511 FOXP1 JASPAR yes 54272393
chr17 39834496 39834517 IRF1 JASPAR yes 54272394
chr17 39834497 39834512 FOXP1 JASPAR yes 54272395
chr17 39834497 39834518 IRF1 JASPAR yes 54272396
chr17 39834497 39835238 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758243
chr17 39834497 39835238 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259518
chr17 39834498 39834513 FOXP1 JASPAR yes 54272397
chr17 39834498 39834519 IRF1 JASPAR yes 54272398
chr17 39834499 39834514 FOXP1 JASPAR yes 54272399
chr17 39834499 39834520 IRF1 JASPAR yes 54272400
chr17 39834500 39834515 FOXP1 JASPAR yes 54272401
chr17 39834502 39834517 FOXP1 JASPAR yes 54272402
chr17 39834503 39834518 STAT2 JASPAR yes 54272403
chr17 39834504 39834519 FOXP1 JASPAR yes 54272404
chr17 39834504 39834525 IRF1 JASPAR yes 54272405
chr17 39834505 39834526 IRF1 JASPAR yes 54272406
chr17 39834506 39834518 FOXC2 JASPAR yes 54272407
chr17 39834507 39834518 FOXP2 JASPAR yes 54272408
chr17 39834508 39835231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758244
chr17 39834508 39835231 PML UCSC Txn Factor no Conserved 108259519
chr17 39834508 39835231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259520
Genes associated with rs569680316[chr17:39834508], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More