EnhancerDB
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  3. rs569860477[chr1:117100588]
Enhancers that have rs569860477[chr1:117100588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117093904 117107375 enh27099
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs569860477[chr1:117100588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117100542 117101226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21333460
chr1 117100542 117101226 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107824615
chr1 117100571 117100591 TP63 JASPAR yes 31819785
chr1 117100577 117100593 ZNF143 JASPAR yes 31819788
chr1 117100582 117100592 SP1 JASPAR yes 31819789
chr1 117100585 117100594 HIC2 JASPAR yes 31819790
chr1 117100588 117100604 NFYA JASPAR yes 31819791
Genes associated with rs569860477[chr1:117100588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More