EnhancerDB
  1. Home
  2. SNP
  3. rs56990446[chr17:39705487]
Enhancers that have rs56990446[chr17:39705487]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs56990446[chr17:39705487]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39704551 39705523 ZBTB33 GTRD no Lung (A549) 21757837
chr17 39704551 39705523 ZBTB33 GTRD no Lung (A549) 108258952
chr17 39704608 39706258 TCF7L2 GTRD no Colon (HCT116) 21757841
chr17 39704608 39706258 TCF7L2 GTRD no Colon (HCT116) 108258957
chr17 39704666 39706567 TCF7L2 GTRD no Colon (HCT116) 21757844
chr17 39704666 39706567 TCF7L2 GTRD no Colon (HCT116) 108258961
chr17 39704864 39705500 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108258969
chr17 39704990 39706666 TCF7L2 GTRD no Colon (HCT116) 21757853
chr17 39704990 39706666 TCF7L2 GTRD no Colon (HCT116) 108258973
chr17 39705008 39705538 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757854
chr17 39705008 39705538 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108258974
chr17 39705043 39706510 TCF7L2 GTRD no Colon (HCT116) 21757855
chr17 39705043 39706510 TCF7L2 GTRD no Colon (HCT116) 108258977
chr17 39705057 39705513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21757856
chr17 39705057 39705513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108258978
chr17 39705076 39706531 TCF7L2 GTRD no Colon (HCT116) 21757858
chr17 39705076 39706531 TCF7L2 GTRD no Colon (HCT116) 108258980
chr17 39705092 39705890 CTCF UCSC Txn Factor no Conserved 108258982
chr17 39705093 39705557 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21757860
chr17 39705093 39705557 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108258983
chr17 39705136 39705790 ZNF263 UCSC Txn Factor no Conserved 108258992
chr17 39705148 39705538 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108258995
chr17 39705176 39705786 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108259004
chr17 39705177 39705757 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108259006
chr17 39705217 39705553 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259011
chr17 39705280 39705736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21757876
chr17 39705280 39705736 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108259013
chr17 39705282 39705766 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757877
chr17 39705282 39705766 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259014
chr17 39705286 39705630 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108259015
chr17 39705307 39705623 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108259016
chr17 39705312 39706588 ZNF143 GTRD no Epithelial (MCF-7) 21757878
chr17 39705312 39706588 ZNF143 GTRD no Epithelial (MCF-7) 108259017
chr17 39705332 39705642 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21757879
chr17 39705332 39705642 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259018
chr17 39705340 39706641 ZNF143 GTRD no Epithelial (MCF-7) 21757880
chr17 39705340 39706641 ZNF143 GTRD no Epithelial (MCF-7) 108259019
chr17 39705345 39705789 ZNF274 GTRD no Bone Marrow (K562) 21757881
chr17 39705345 39705789 ZNF274 GTRD no Bone Marrow (K562) 108259020
chr17 39705346 39706002 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757882
chr17 39705346 39706002 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259021
chr17 39705349 39705925 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757883
chr17 39705349 39705925 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259022
chr17 39705350 39706956 ZNF143 GTRD no Epithelial (MCF-7) 21757884
chr17 39705350 39706956 ZNF143 GTRD no Epithelial (MCF-7) 108259023
chr17 39705362 39706624 TCF7L2 GTRD no Colon (HCT116) 21757885
chr17 39705362 39706624 TCF7L2 GTRD no Colon (HCT116) 108259024
chr17 39705389 39706597 ZNF143 GTRD no Epithelial (MCF-7) 21757886
chr17 39705405 39706199 TCF7L2 GTRD no Colon (HCT116) 21757887
chr17 39705411 39705643 ZNF274 GTRD no Bone Marrow (K562) 21757888
chr17 39705424 39705928 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21757889
chr17 39705459 39706645 ZNF143 GTRD no Epithelial (MCF-7) 21757890
chr17 39705466 39706521 ZNF143 GTRD no Epithelial (MCF-7) 21757891
chr17 39705474 39705489 PRDM1 JASPAR yes 54263997
chr17 39705475 39706538 ZNF143 GTRD no Epithelial (MCF-7) 21757892
Genes associated with rs56990446[chr17:39705487], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More