EnhancerDB
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  3. rs56993625[chr12:47663546]
Enhancers that have rs56993625[chr12:47663546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47659234 47678378 enh2316
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56993625[chr12:47663546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47663544 47663556 PKNOX1 JASPAR yes 120689998
chr12 47663544 47663556 PKNOX2 JASPAR yes 120689999
chr12 47663544 47663556 TGIF1 JASPAR yes 120690000
chr12 47663544 47663556 TGIF2 JASPAR yes 120690001
chr12 47663544 47663559 SCRT1 JASPAR yes 120690002
chr12 47663545 47663555 FIGLA JASPAR yes 120690003
chr12 47663545 47663555 MSC JASPAR yes 120690004
chr12 47663546 47663555 SNAI2 JASPAR yes 120690005
Genes associated with rs56993625[chr12:47663546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More