EnhancerDB
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  3. rs57019242[chr6:15313419]
Enhancers that have rs57019242[chr6:15313419]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 15294943 15321095 enh38820
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs57019242[chr6:15313419]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 15313257 15314115 POLR2A UCSC Txn Factor no Conserved 108538801
chr6 15313411 15313421 OLIG2 JASPAR yes 100203091
chr6 15313411 15313421 OLIG3 JASPAR yes 100203092
chr6 15313411 15313429 MAFF JASPAR yes 100203093
chr6 15313413 15313428 FOXA1 JASPAR yes 100203094
chr6 15313415 15313427 FOXC2 JASPAR yes 100203095
chr6 15313416 15313427 FOXB1 JASPAR yes 100203096
chr6 15313416 15313427 FOXC1 JASPAR yes 100203097
chr6 15313417 15313428 FOXA1 JASPAR yes 100203098
Genes associated with rs57019242[chr6:15313419], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More