-
Home
- SNP
- rs570247996[chr1:212643467]
Enhancers that have rs570247996[chr1:212643467]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
212635025 |
212646104 |
enh913 |
|
|
Transcript factors that have rs570247996[chr1:212643467]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
212642847
|
212643740
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21378779
|
|
|
chr1
|
212642847
|
212643740
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107868310
|
|
|
chr1
|
212642955
|
212643651
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21378780
|
|
|
chr1
|
212642955
|
212643651
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
107868311
|
|
|
chr1
|
212643055
|
212643551
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868312
|
|
|
chr1
|
212643065
|
212643623
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
107868313
|
|
|
chr1
|
212643082
|
212643576
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107868314
|
|
|
chr1
|
212643100
|
212643572
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
107868315
|
|
|
chr1
|
212643319
|
212643783
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
21378781
|
|
|
chr1
|
212643319
|
212643783
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Colon (HCT116)
|
107868316
|
|
|
chr1
|
212643416
|
212643800
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
107868317
|
|
|
chr1
|
212643430
|
212643840
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
107868318
|
|
|
chr1
|
212643453
|
212643716
|
FOS
|
UCSC Txn Factor
|
no
|
Conserved
|
107868319
|
|
|
chr1
|
212643464
|
212643481
|
RXRA
|
JASPAR
|
yes
|
|
35126864
|
|
|
chr1
|
212643467
|
212643478
|
ESRRA
|
JASPAR
|
yes
|
|
35126865
|
|
Genes associated with rs570247996[chr1:212643467], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |