EnhancerDB
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  3. rs570301409[chr16:85171057]
Enhancers that have rs570301409[chr16:85171057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85155669 85199515 enh16863
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs570301409[chr16:85171057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85167902 85173252 ZNF143 GTRD no Epithelial (MCF-7) 21720117
chr16 85167902 85173252 ZNF143 GTRD no Epithelial (MCF-7) 108213348
chr16 85167907 85172163 TCF7L2 GTRD no Colon (HCT116) 108213349
chr16 85168302 85173255 TCF7L2 GTRD no Colon (HCT116) 108213350
chr16 85168376 85171973 TCF7L2 GTRD no Colon (HCT116) 108213352
chr16 85168428 85172197 TCF7L2 GTRD no Colon (HCT116) 108213354
chr16 85168442 85172303 TCF7L2 GTRD no Colon (HCT116) 108213355
chr16 85168580 85174322 ZNF274 GTRD no Bone Marrow (K562) 108213357
chr16 85168793 85172995 ZNF274 GTRD no Bone Marrow (K562) 108213365
chr16 85169126 85173192 ZNF274 GTRD no Liver (HepG2) 21720127
chr16 85169126 85173192 ZNF274 GTRD no Liver (HepG2) 108213373
chr16 85169135 85173333 ZNF274 GTRD no Bone Marrow (K562) 108213374
chr16 85169160 85171110 ZNF143 GTRD no Epithelial (MCF-7) 21720128
chr16 85169160 85171110 ZNF143 GTRD no Epithelial (MCF-7) 108213375
chr16 85169191 85172012 ZNF274 GTRD no Bone Marrow (K562) 108213376
chr16 85169296 85173225 ZNF143 GTRD no Epithelial (MCF-7) 21720130
chr16 85169296 85173225 ZNF143 GTRD no Epithelial (MCF-7) 108213380
chr16 85169331 85174983 ZNF143 GTRD no Epithelial (MCF-7) 21720131
chr16 85169331 85174983 ZNF143 GTRD no Epithelial (MCF-7) 108213381
chr16 85169348 85172174 TCF7L2 GTRD no Colon (HCT116) 108213382
chr16 85169353 85171161 ZNF274 GTRD no Bone Marrow (K562) 108213384
chr16 85169371 85173163 ZNF274 GTRD no Liver (HepG2) 21720133
chr16 85169371 85173163 ZNF274 GTRD no Liver (HepG2) 108213386
chr16 85169384 85173229 ZNF274 GTRD no Bone Marrow (K562) 108213387
chr16 85169437 85173225 ZNF274 GTRD no Bone Marrow (K562) 108213389
chr16 85169499 85173158 ZNF274 GTRD no Bone Marrow (K562) 108213391
chr16 85169507 85176130 ZNF274 GTRD no Bone Marrow (K562) 108213392
chr16 85169531 85171610 TCF7L2 GTRD no Colon (HCT116) 108213394
chr16 85169533 85174853 ZNF274 GTRD no Liver (HepG2) 21720134
chr16 85169533 85174853 ZNF274 GTRD no Liver (HepG2) 108213395
chr16 85169759 85174918 ZNF274 GTRD no Bone Marrow (K562) 108213407
chr16 85170121 85171367 POLR2A UCSC Txn Factor no Conserved 108213423
chr16 85170201 85175135 ZNF274 GTRD no Liver (HepG2) 21720148
chr16 85170303 85173247 ZNF143 GTRD no Epithelial (MCF-7) 21720152
chr16 85170352 85174989 ZNF274 GTRD no Liver (HepG2) 21720155
chr16 85170379 85171917 ZNF274 GTRD no Liver (HepG2) 21720158
chr16 85170557 85171173 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720172
chr16 85170866 85171370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21720178
chr16 85170913 85171357 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21720179
chr16 85170950 85171266 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720180
chr16 85171016 85175091 ZNF143 GTRD no Epithelial (MCF-7) 21720181
chr16 85171021 85171411 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21720182
chr16 85171040 85171436 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21720183
chr16 85171052 85171252 ZNF274 GTRD no Liver (HepG2) 21720184
chr16 85171054 85171068 GLIS2 JASPAR yes 12023676
Genes associated with rs570301409[chr16:85171057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More