EnhancerDB
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  3. rs570306201[chr17:80236186]
Enhancers that have rs570306201[chr17:80236186]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs570306201[chr17:80236186]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80236037 80237798 TCF7L2 GTRD no Colon (HCT116) 21798502
chr17 80236088 80236404 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21798503
chr17 80236104 80237724 TCF7L2 GTRD no Colon (HCT116) 21798504
chr17 80236142 80237713 TCF7L2 GTRD no Colon (HCT116) 21798505
chr17 80236170 80236187 NR3C1 JASPAR yes 56356512
chr17 80236170 80236187 NR3C2 JASPAR yes 56356513
chr17 80236177 80236197 TP53 JASPAR yes 56356514
chr17 80236186 80236201 FOXA1 JASPAR yes 56356515
Genes associated with rs570306201[chr17:80236186], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More