EnhancerDB
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  3. rs570556039[chr1:23940509]
Enhancers that have rs570556039[chr1:23940509]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs570556039[chr1:23940509]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23940503 23940512 HiNF-C TRANSFAC yes 27447909
chr1 23940503 23940513 SP1 JASPAR yes 27447910
chr1 23940504 23940510 SP1 TRANSFAC yes 27447911
chr1 23940505 23940510 SP1 TRANSFAC yes 27447912
chr1 23940505 23940516 E2F4 JASPAR yes 27447913
chr1 23940506 23940511 SP1 TRANSFAC yes 27447914
chr1 23940506 23940512 SP1 TRANSFAC yes 27447915
chr1 23940506 23940516 SP1 JASPAR yes 27447916
chr1 23940507 23940517 SP1 JASPAR yes 27447917
chr1 23940507 23940517 ZNF740 JASPAR yes 27447918
Genes associated with rs570556039[chr1:23940509], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More