EnhancerDB
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  3. rs570880219[chr17:80245501]
Enhancers that have rs570880219[chr17:80245501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs570880219[chr17:80245501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 21798573
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 108311423
chr17 80245019 80245527 ZNF143 GTRD no Epithelial (MCF-7) 21798574
chr17 80245035 80245539 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798576
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 21798577
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 108311424
chr17 80245072 80245512 ZNF143 GTRD no Epithelial (MCF-7) 21798578
chr17 80245343 80246140 SETDB1 UCSC Txn Factor no Conserved 108311425
chr17 80245501 80245505 NFE TRANSFAC yes 56358025
chr17 80245501 80245506 GATA1 TRANSFAC yes 56358026
chr17 80245501 80245507 GATA3 JASPAR yes 56358027
Genes associated with rs570880219[chr17:80245501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More