EnhancerDB
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  3. rs571343662[chr16:27299239]
Enhancers that have rs571343662[chr16:27299239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27290645 27303235 enh31752
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell)
chr16 27299134 27299462 vista22267
VISTA
Transcript factors that have rs571343662[chr16:27299239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27298562 27300545 ZNF274 GTRD no Blood (GM12878) 21700623
chr16 27298562 27300545 ZNF274 GTRD no Blood (GM12878) 108190283
chr16 27298637 27301044 ZNF274 GTRD no Blood (GM12878) 21700624
chr16 27298637 27301044 ZNF274 GTRD no Blood (GM12878) 108190284
chr16 27299228 27299239 USF1 JASPAR yes 10183717
chr16 27299228 27299239 USF2 JASPAR yes 10183718
chr16 27299228 27299239 USF1 JASPAR yes 49360701
chr16 27299228 27299239 USF2 JASPAR yes 49360702
chr16 27299229 27299239 MAX JASPAR yes 10183719
chr16 27299229 27299239 MAX JASPAR yes 49360703
chr16 27299234 27299254 TP63 JASPAR yes 10183720
chr16 27299234 27299254 TP63 JASPAR yes 49360704
chr16 27299235 27299253 TP53 JASPAR yes 10183721
chr16 27299235 27299253 TP63 JASPAR yes 10183722
chr16 27299235 27299253 TP73 JASPAR yes 10183723
chr16 27299235 27299253 TP53 JASPAR yes 49360705
chr16 27299235 27299253 TP63 JASPAR yes 49360706
chr16 27299235 27299253 TP73 JASPAR yes 49360707
chr16 27299236 27299251 TP53 JASPAR yes 10183724
chr16 27299236 27299251 TP53 JASPAR yes 49360708
chr16 27299236 27299256 TP53 JASPAR yes 10183725
chr16 27299236 27299256 TP53 JASPAR yes 49360709
chr16 27299237 27299252 TP53 JASPAR yes 10183726
chr16 27299237 27299252 TP53 JASPAR yes 49360710
Genes associated with rs571343662[chr16:27299239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More