EnhancerDB
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  3. rs571557662[chr17:39823138]
Enhancers that have rs571557662[chr17:39823138]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs571557662[chr17:39823138]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39822974 39823598 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21758178
chr17 39822974 39823598 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108259390
chr17 39823099 39823603 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259391
chr17 39823129 39823150 ZNF263 JASPAR yes 54270575
chr17 39823132 39823153 ZNF263 JASPAR yes 54270576
chr17 39823135 39823150 NR2C2 JASPAR yes 54270577
chr17 39823135 39823155 RREB1 JASPAR yes 54270578
chr17 39823135 39823156 ZNF263 JASPAR yes 54270579
chr17 39823135 39823711 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108259392
chr17 39823136 39823146 ZNF740 JASPAR yes 54270580
chr17 39823137 39823157 RREB1 JASPAR yes 54270581
chr17 39823138 39823152 PLAG1 JASPAR yes 54270582
chr17 39823138 39823158 RREB1 JASPAR yes 54270583
chr17 39823138 39823159 ZNF263 JASPAR yes 54270584
Genes associated with rs571557662[chr17:39823138], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More