EnhancerDB
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  3. rs571565417[chr17:79399608]
Enhancers that have rs571565417[chr17:79399608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs571565417[chr17:79399608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79398783 79399616 TCF7L2 GTRD no Colon (HCT116) 21797978
chr17 79398783 79399616 TCF7L2 GTRD no Colon (HCT116) 108309618
chr17 79399389 79399699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309621
chr17 79399389 79399699 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108309622
chr17 79399547 79399823 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21797981
chr17 79399547 79399823 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108309623
chr17 79399547 79399823 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108309624
chr17 79399558 79399834 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108309625
chr17 79399558 79399834 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108309626
chr17 79399591 79399611 RREB1 JASPAR yes 56327186
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309627
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309628
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309629
chr17 79399598 79399618 RREB1 JASPAR yes 56327187
chr17 79399601 79399621 RREB1 JASPAR yes 56327189
chr17 79399602 79399622 RREB1 JASPAR yes 56327190
Genes associated with rs571565417[chr17:79399608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More