EnhancerDB
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  3. rs571595219[chr12:54657581]
Enhancers that have rs571595219[chr12:54657581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54649185 54662915 enh2377
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs571595219[chr12:54657581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54657561 54657582 IRF1 JASPAR yes 121032198
chr12 54657562 54657583 IRF1 JASPAR yes 121032200
chr12 54657563 54657584 IRF1 JASPAR yes 121032201
chr12 54657567 54657582 FOXP1 JASPAR yes 121032202
chr12 54657568 54657589 IRF1 JASPAR yes 121032203
chr12 54657569 54657584 FOXP1 JASPAR yes 121032204
chr12 54657569 54657584 LEF1 JASPAR yes 121032205
chr12 54657569 54657590 IRF1 JASPAR yes 121032206
chr12 54657570 54657591 IRF1 JASPAR yes 121032207
chr12 54657574 54657589 FOXP1 JASPAR yes 121032208
chr12 54657574 54657595 IRF1 JASPAR yes 121032209
chr12 54657575 54657590 FOXP1 JASPAR yes 121032210
Genes associated with rs571595219[chr12:54657581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More