EnhancerDB
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  3. rs571642172[chr6:18340608]
Enhancers that have rs571642172[chr6:18340608]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 18333303 18355574 enh8984
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs571642172[chr6:18340608]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 18340603 18340618 MEF2C JASPAR yes 100433442
chr6 18340606 18340621 FOXP1 JASPAR yes 100433443
chr6 18340607 18340613 TBP TRANSFAC yes 100433444
chr6 18340607 18340622 FOXP1 JASPAR yes 100433445
chr6 18340608 18340623 FOXP1 JASPAR yes 100433446
chr6 18340608 18340629 IRF1 JASPAR yes 100433447
Genes associated with rs571642172[chr6:18340608], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More