EnhancerDB
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  3. rs571717540[chr17:38473958]
Enhancers that have rs571717540[chr17:38473958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38463228 38485935 enh4408
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
Transcript factors that have rs571717540[chr17:38473958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38473941 38473962 IRF1 JASPAR yes 54204493
chr17 38473943 38473964 IRF1 JASPAR yes 54204494
chr17 38473945 38473966 IRF1 JASPAR yes 54204495
chr17 38473946 38473961 FOXP1 JASPAR yes 54204496
chr17 38473946 38473967 IRF1 JASPAR yes 54204497
chr17 38473947 38473968 IRF1 JASPAR yes 54204498
chr17 38473948 38473963 FOXP1 JASPAR yes 54204499
chr17 38473949 38473964 FOXP1 JASPAR yes 54204500
chr17 38473950 38473965 FOXP1 JASPAR yes 54204501
chr17 38473951 38473966 FOXP1 JASPAR yes 54204502
chr17 38473951 38473972 IRF1 JASPAR yes 54204503
chr17 38473952 38473967 FOXP1 JASPAR yes 54204504
chr17 38473953 38473968 FOXP1 JASPAR yes 54204505
chr17 38473953 38473974 IRF1 JASPAR yes 54204506
chr17 38473957 38473971 IRF7 JASPAR yes 54204507
Genes associated with rs571717540[chr17:38473958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More