EnhancerDB
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  3. rs571855227[chr19:960569]
Enhancers that have rs571855227[chr19:960569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs571855227[chr19:960569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 958552 960739 TCF7L2 GTRD no Colon (HCT116) 21831317
chr19 958552 960739 TCF7L2 GTRD no Colon (HCT116) 108349024
chr19 958613 961627 TCF7L2 GTRD no Colon (HCT116) 21831318
chr19 958613 961627 TCF7L2 GTRD no Colon (HCT116) 108349025
chr19 958723 962738 ZNF274 GTRD no Liver (HepG2) 21831320
chr19 958723 962738 ZNF274 GTRD no Liver (HepG2) 108349028
chr19 958738 960580 ZNF274 GTRD no Bone Marrow (K562) 21831324
chr19 958738 960580 ZNF274 GTRD no Bone Marrow (K562) 108349035
chr19 958765 961613 ZNF274 GTRD no Bone Marrow (K562) 21831329
chr19 958765 961613 ZNF274 GTRD no Bone Marrow (K562) 108349042
chr19 958798 963263 ZNF274 GTRD no Bone Marrow (K562) 21831341
chr19 958798 963263 ZNF274 GTRD no Bone Marrow (K562) 108349056
chr19 958957 960595 TCF7L2 GTRD no Colon (HCT116) 21831411
chr19 958957 960595 TCF7L2 GTRD no Colon (HCT116) 108349146
chr19 960559 960569 ID4 JASPAR yes 111987876
chr19 960559 960569 NHLH1 JASPAR yes 111987877
chr19 960559 960569 TCF3 JASPAR yes 111987878
chr19 960559 960569 TCF4 JASPAR yes 111987879
chr19 960561 960570 ZEB1 JASPAR yes 111987880
Genes associated with rs571855227[chr19:960569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More