EnhancerDB
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  3. rs571883452[chr1:202008778]
Enhancers that have rs571883452[chr1:202008778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs571883452[chr1:202008778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 21365535
chr1 202005343 202013233 ZNF274 GTRD no Cervix (HeLa-S3) 107857423
chr1 202006897 202008937 ZNF274 GTRD no Bone Marrow (K562) 107857427
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 21365578
chr1 202007155 202008962 ZNF274 GTRD no Cervix (HeLa-S3) 107857430
chr1 202007408 202011594 ZNF143 GTRD no Epithelial (MCF-7) 21365579
chr1 202007408 202011594 ZNF143 GTRD no Epithelial (MCF-7) 107857436
chr1 202007719 202009431 ZNF143 GTRD no Epithelial (MCF-7) 21365583
chr1 202007719 202009431 ZNF143 GTRD no Epithelial (MCF-7) 107857447
chr1 202007829 202008778 ZNF143 GTRD no Epithelial (MCF-7) 21365594
chr1 202007829 202008778 ZNF143 GTRD no Epithelial (MCF-7) 107857463
chr1 202007869 202008888 ZNF143 GTRD no Epithelial (MCF-7) 21365598
chr1 202007869 202008888 ZNF143 GTRD no Epithelial (MCF-7) 107857475
chr1 202007883 202009228 ZNF143 GTRD no Epithelial (MCF-7) 21365601
chr1 202007883 202009228 ZNF143 GTRD no Epithelial (MCF-7) 107857479
chr1 202007918 202009550 ZNF143 GTRD no Epithelial (MCF-7) 21365608
chr1 202007918 202009550 ZNF143 GTRD no Epithelial (MCF-7) 107857492
chr1 202007996 202008784 ZNF143 GTRD no Epithelial (MCF-7) 21365618
chr1 202007996 202008784 ZNF143 GTRD no Epithelial (MCF-7) 107857509
chr1 202008006 202008851 ZNF143 GTRD no Epithelial (MCF-7) 21365619
chr1 202008006 202008851 ZNF143 GTRD no Epithelial (MCF-7) 107857510
chr1 202008020 202008875 ZNF274 GTRD no Bone Marrow (K562) 107857515
chr1 202008026 202009357 ZNF143 GTRD no Epithelial (MCF-7) 21365624
chr1 202008026 202009357 ZNF143 GTRD no Epithelial (MCF-7) 107857517
chr1 202008702 202009113 TCF7L2 GTRD no Colon (HCT116) 21365633
chr1 202008771 202008786 MEF2C JASPAR yes 34544974
chr1 202008772 202008787 MEF2A JASPAR yes 34544975
chr1 202008773 202008785 MEF2A JASPAR yes 34544976
chr1 202008773 202008785 MEF2D JASPAR yes 34544977
chr1 202008775 202008789 FOXF2 JASPAR yes 34544978
chr1 202008775 202008789 ONECUT3 JASPAR yes 34544979
chr1 202008775 202008790 FOXP1 JASPAR yes 34544980
chr1 202008776 202008787 FOXA1 JASPAR yes 34544981
chr1 202008776 202008791 FOXA1 JASPAR yes 34544982
chr1 202008777 202008788 FOXB1 JASPAR yes 34544983
chr1 202008777 202008788 FOXC1 JASPAR yes 34544984
chr1 202008777 202008789 FOXC2 JASPAR yes 34544985
chr1 202008778 202008790 FOXI1 JASPAR yes 34544986
Genes associated with rs571883452[chr1:202008778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More