EnhancerDB
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  3. rs571909754[chr19:5128872]
Enhancers that have rs571909754[chr19:5128872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5119813 5130815 enh4978
Bone Marrow (K562) Brain (SK-N-SH) Brain (SK-N-MC) Ovary Lung Stomach Muscle (A673) Placenta Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Heart
Transcript factors that have rs571909754[chr19:5128872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5125853 5134054 ZNF274 GTRD no Blood (GM12878) 108374652
chr19 5125853 5134054 ZNF274 GTRD no Blood (GM12878) 108374653
chr19 5127574 5129566 TCF7L2 GTRD no Colon (HCT116) 108374673
chr19 5127641 5129159 TCF7L2 GTRD no Colon (HCT116) 108374675
chr19 5127738 5130032 ZNF274 GTRD no Bone Marrow (K562) 21843076
chr19 5127738 5130032 ZNF274 GTRD no Bone Marrow (K562) 108374679
chr19 5127848 5129519 TCF7L2 GTRD no Colon (HCT116) 108374682
chr19 5127878 5129494 TCF7L2 GTRD no Colon (HCT116) 108374684
chr19 5127951 5129632 ZNF274 GTRD no Bone Marrow (K562) 21843077
chr19 5127951 5129632 ZNF274 GTRD no Bone Marrow (K562) 108374685
chr19 5128857 5128877 RREB1 JASPAR yes 112218308
chr19 5128858 5128872 GLIS2 JASPAR yes 112218310
chr19 5128858 5128879 ZNF263 JASPAR yes 112218311
chr19 5128860 5128880 RREB1 JASPAR yes 112218313
chr19 5128862 5128882 RREB1 JASPAR yes 112218316
chr19 5128863 5128883 RREB1 JASPAR yes 112218317
chr19 5128864 5128878 PLAG1 JASPAR yes 112218318
chr19 5128865 5128872 SP1 TRANSFAC yes 112218319
chr19 5128865 5128875 SP1 JASPAR yes 112218320
chr19 5128865 5128879 PLAG1 JASPAR yes 112218321
chr19 5128866 5128874 SP1 TRANSFAC yes 112218322
chr19 5128867 5128872 SP1 TRANSFAC yes 112218323
chr19 5128867 5128878 E2F4 JASPAR yes 112218324
chr19 5128868 5128873 SP1 TRANSFAC yes 112218325
chr19 5128868 5128874 SP1 TRANSFAC yes 112218326
chr19 5128868 5128878 SP1 JASPAR yes 112218327
chr19 5128869 5128879 ZNF740 JASPAR yes 112218328
chr19 5128870 5128880 SP1 JASPAR yes 112218329
chr19 5128870 5128880 ZNF740 JASPAR yes 112218330
chr19 5128870 5128885 NR2C2 JASPAR yes 112218331
chr19 5128871 5128881 SP1 JASPAR yes 112218332
chr19 5128871 5128881 ZNF740 JASPAR yes 112218333
chr19 5128872 5128882 SP1 JASPAR yes 112218334
chr19 5128872 5128882 ZNF740 JASPAR yes 112218335
Genes associated with rs571909754[chr19:5128872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More