EnhancerDB
  1. Home
  2. SNP
  3. rs571979376[chr1:12654039]
Enhancers that have rs571979376[chr1:12654039]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs571979376[chr1:12654039]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12654031 12654045 RXRB JASPAR yes 26836630
chr1 12654031 12654045 RXRG JASPAR yes 26836631
chr1 12654031 12654046 HNF4G JASPAR yes 26836632
chr1 12654031 12654046 NR2C2 JASPAR yes 26836633
chr1 12654038 12654052 RXRB JASPAR yes 26836634
chr1 12654038 12654053 NR2C2 JASPAR yes 26836635
Genes associated with rs571979376[chr1:12654039], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More