EnhancerDB
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  3. rs572001166[chr6:17720580]
Enhancers that have rs572001166[chr6:17720580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs572001166[chr6:17720580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17720574 17720595 IRF1 JASPAR yes 100396974
chr6 17720579 17720594 FOXP1 JASPAR yes 100396975
chr6 17720580 17720595 FOXP1 JASPAR yes 100396976
Genes associated with rs572001166[chr6:17720580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More