EnhancerDB
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  3. rs572143890[chr16:11304101]
Enhancers that have rs572143890[chr16:11304101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11290643 11309119 enh16533
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Liver Blood (GM12878) Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs572143890[chr16:11304101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11302714 11304497 ZNF143 GTRD no Epithelial (MCF-7) 21690081
chr16 11302743 11304340 ZNF143 GTRD no Epithelial (MCF-7) 21690083
chr16 11302747 11304431 ZNF143 GTRD no Epithelial (MCF-7) 21690084
chr16 11302748 11304501 ZNF143 GTRD no Epithelial (MCF-7) 21690085
chr16 11302759 11304335 ZNF143 GTRD no Epithelial (MCF-7) 21690086
chr16 11302877 11304318 ZNF143 GTRD no Epithelial (MCF-7) 21690091
chr16 11302938 11304413 ZNF143 GTRD no Epithelial (MCF-7) 21690095
chr16 11302956 11304158 ZNF274 GTRD no Bone Marrow (K562) 21690097
chr16 11302957 11304187 ZNF143 GTRD no Epithelial (MCF-7) 21690098
chr16 11302964 11304121 ZNF143 GTRD no Epithelial (MCF-7) 21690099
chr16 11303037 11304157 ZNF143 GTRD no Epithelial (MCF-7) 21690103
chr16 11303039 11304556 ZNF143 GTRD no Epithelial (MCF-7) 21690105
chr16 11303074 11304289 ZNF143 GTRD no Epithelial (MCF-7) 21690107
chr16 11303086 11304231 ZNF143 GTRD no Epithelial (MCF-7) 21690111
chr16 11303095 11304404 ZNF143 GTRD no Epithelial (MCF-7) 21690113
chr16 11303170 11304155 ZNF143 GTRD no Epithelial (MCF-7) 21690116
chr16 11303508 11304385 ZNF143 GTRD no Epithelial (MCF-7) 21690121
chr16 11303742 11304317 ZNF143 GTRD no Epithelial (MCF-7) 21690123
chr16 11303870 11304276 ZNF143 GTRD no Epithelial (MCF-7) 21690124
chr16 11304090 11304111 ZNF263 JASPAR yes 9495457
chr16 11304092 11304104 HINFP JASPAR yes 9495459
chr16 11304101 11304115 MTF1 JASPAR yes 9495460
Genes associated with rs572143890[chr16:11304101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More