EnhancerDB
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  3. rs572154274[chr1:40286429]
Enhancers that have rs572154274[chr1:40286429]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs572154274[chr1:40286429]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40286417 40286432 ZIC3 JASPAR yes 28293201
chr1 40286417 40286432 ZIC4 JASPAR yes 28293202
chr1 40286424 40286435 NFKB1 JASPAR yes 28293203
chr1 40286425 40286435 NFKB1 JASPAR yes 28293204
Genes associated with rs572154274[chr1:40286429], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More