EnhancerDB
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  3. rs572227955[chr6:108977340]
Enhancers that have rs572227955[chr6:108977340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108963593 108977475 enh39317
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Astrocyte Stomach Thyroid Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Uterus Thymus Heart
Transcript factors that have rs572227955[chr6:108977340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108977321 108977341 RREB1 JASPAR yes 104190117
chr6 108977323 108977343 RREB1 JASPAR yes 104190119
chr6 108977324 108977344 RREB1 JASPAR yes 104190120
chr6 108977327 108977347 RREB1 JASPAR yes 104190121
chr6 108977329 108977349 RREB1 JASPAR yes 104190123
chr6 108977335 108977350 FOXP1 JASPAR yes 104190124
chr6 108977337 108977352 FOXP1 JASPAR yes 104190125
chr6 108977338 108977353 STAT2 JASPAR yes 104190126
chr6 108977338 108977359 IRF1 JASPAR yes 104190127
chr6 108977339 108977354 FOXP1 JASPAR yes 104190128
chr6 108977340 108977361 IRF1 JASPAR yes 104190129
Genes associated with rs572227955[chr6:108977340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More