EnhancerDB
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  3. rs572240385[chr12:50614609]
Enhancers that have rs572240385[chr12:50614609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50600876 50615015 enh2345
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Stomach Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs572240385[chr12:50614609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50614602 50614612 HOXD13 JASPAR yes 120820275
chr12 50614604 50614609 TBP TRANSFAC yes 120820277
chr12 50614604 50614610 TFIID TRANSFAC yes 120820278
chr12 50614609 50614625 ZNF143 JASPAR yes 120820279
Genes associated with rs572240385[chr12:50614609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More