EnhancerDB
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Enhancers that have rs57227353[chr17:80246609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs57227353[chr17:80246609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 21798573
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 108311423
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 21798577
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 108311424
chr17 80245504 80247245 TCF7L2 GTRD no Colon (HCT116) 21798581
chr17 80245504 80247245 TCF7L2 GTRD no Colon (HCT116) 108311426
chr17 80245640 80246930 ZNF143 GTRD no Epithelial (MCF-7) 21798585
chr17 80245640 80246930 ZNF143 GTRD no Epithelial (MCF-7) 108311430
chr17 80245917 80246641 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798646
chr17 80245917 80246641 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311505
chr17 80245920 80246642 TCF7L2 GTRD no Colon (HCT116) 21798648
chr17 80245920 80246642 TCF7L2 GTRD no Colon (HCT116) 108311507
chr17 80245926 80246795 TCF7L2 GTRD no Colon (HCT116) 21798653
chr17 80245926 80246795 TCF7L2 GTRD no Colon (HCT116) 108311513
chr17 80245959 80246609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798666
chr17 80245959 80246609 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311530
chr17 80246173 80246823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798678
chr17 80246173 80246823 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311542
chr17 80246192 80246872 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21798679
chr17 80246192 80246872 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108311543
chr17 80246195 80246699 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108311544
chr17 80246316 80247044 ZNF143 GTRD no Epithelial (MCF-7) 21798680
chr17 80246443 80247046 ZNF143 GTRD no Epithelial (MCF-7) 21798681
chr17 80246477 80247006 ZNF274 GTRD no Bone Marrow (K562) 21798682
chr17 80246545 80246930 ZNF143 GTRD no Epithelial (MCF-7) 21798683
chr17 80246606 80246624 NFYA JASPAR yes 56358213
chr17 80246609 80246625 NFYA JASPAR yes 56358214
Genes associated with rs57227353[chr17:80246609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More