EnhancerDB
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  3. rs572294452[chr1:202048358]
Enhancers that have rs572294452[chr1:202048358]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs572294452[chr1:202048358]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 21366478
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 107857652
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 21366484
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 107857654
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 21366526
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 107857704
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 21366533
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 107857713
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 21366534
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 107857714
chr1 202045553 202048520 ZNF143 GTRD no Epithelial (MCF-7) 21366540
chr1 202045621 202048485 ZNF143 GTRD no Epithelial (MCF-7) 21366547
chr1 202045775 202048411 ZNF143 GTRD no Epithelial (MCF-7) 21366556
chr1 202046071 202048502 ZNF274 GTRD no Liver (HepG2) 21366634
chr1 202047739 202048433 ZNF274 GTRD no Liver (HepG2) 21366691
chr1 202047899 202048656 ZNF274 GTRD no Liver (HepG2) 21366692
chr1 202047945 202048533 ZNF274 GTRD no Liver (HepG2) 21366693
chr1 202047969 202048450 ZNF274 GTRD no Liver (HepG2) 21366694
chr1 202048353 202048374 IRF1 JASPAR yes 34550645
chr1 202048355 202048376 IRF1 JASPAR yes 34550646
Genes associated with rs572294452[chr1:202048358], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More