EnhancerDB
  1. Home
  2. SNP
  3. rs572296439[chr16:11456871]
Enhancers that have rs572296439[chr16:11456871]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11445105 11460875 enh3886
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs572296439[chr16:11456871]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11456860 11456873 NR2F1 JASPAR yes 9510079
chr16 11456864 11456881 RXRA JASPAR yes 9510080
Genes associated with rs572296439[chr16:11456871], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More