EnhancerDB
  1. Home
  2. SNP
  3. rs572318780[chr1:17875291]
Enhancers that have rs572318780[chr1:17875291]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs572318780[chr1:17875291]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17873633 17875473 ZBTB33 GTRD no Brain (SK-N-SH) 21325262
chr1 17873633 17875473 ZBTB33 GTRD no Brain (SK-N-SH) 107802266
chr1 17875281 17875291 ID4 JASPAR yes 27100177
chr1 17875281 17875291 TCF3 JASPAR yes 27100178
chr1 17875281 17875291 TCF4 JASPAR yes 27100179
chr1 17875283 17875292 ZEB1 JASPAR yes 27100180
Genes associated with rs572318780[chr1:17875291], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More