EnhancerDB
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  3. rs572320235[chr19:1215980]
Enhancers that have rs572320235[chr19:1215980]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1201505 1220340 enh17841
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs572320235[chr19:1215980]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1214805 1216132 TCF7L2 GTRD no Colon (HCT116) 21831931
chr19 1214805 1216132 TCF7L2 GTRD no Colon (HCT116) 108351474
chr19 1215155 1217561 AR GTRD no Prostate (PC-3) 108351483
chr19 1215969 1215982 NFKB1 JASPAR yes 112003661
chr19 1215974 1215980 ZNF354C JASPAR yes 112003662
Genes associated with rs572320235[chr19:1215980], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More