EnhancerDB
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  3. rs572345837[chr19:4980432]
Enhancers that have rs572345837[chr19:4980432]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4966316 4995955 enh4974
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs572345837[chr19:4980432]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4980422 4980443 IRF1 JASPAR yes 112201775
chr19 4980424 4980439 PRDM1 JASPAR yes 112201776
chr19 4980424 4980439 STAT2 JASPAR yes 112201777
chr19 4980425 4980439 SPIC JASPAR yes 112201778
chr19 4980425 4980439 STAT1 JASPAR yes 112201779
chr19 4980426 4980447 IRF1 JASPAR yes 112201780
chr19 4980427 4980442 FOXP1 JASPAR yes 112201781
chr19 4980427 4980448 IRF1 JASPAR yes 112201782
chr19 4980428 4980449 IRF1 JASPAR yes 112201783
chr19 4980429 4980444 FOXP1 JASPAR yes 112201784
chr19 4980429 4980450 IRF1 JASPAR yes 112201785
chr19 4980430 4980451 IRF1 JASPAR yes 112201786
chr19 4980431 4980446 FOXP1 JASPAR yes 112201787
chr19 4980431 4980452 IRF1 JASPAR yes 112201788
chr19 4980432 4980447 FOXP1 JASPAR yes 112201789
chr19 4980432 4980453 IRF1 JASPAR yes 112201790
Genes associated with rs572345837[chr19:4980432], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More