EnhancerDB
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  3. rs572394196[chr6:17907791]
Enhancers that have rs572394196[chr6:17907791]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17902765 17917095 enh23087
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs572394196[chr6:17907791]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17907782 17907797 FOXP1 JASPAR yes 100404266
chr6 17907783 17907798 FOXP1 JASPAR yes 100404267
chr6 17907783 17907804 IRF1 JASPAR yes 100404268
chr6 17907784 17907799 FOXP1 JASPAR yes 100404269
chr6 17907785 17907800 FOXP1 JASPAR yes 100404270
chr6 17907787 17907808 IRF1 JASPAR yes 100404271
chr6 17907791 17907805 SPI1 JASPAR yes 100404272
chr6 17907791 17907805 STAT1 JASPAR yes 100404273
chr6 17907791 17907806 STAT2 JASPAR yes 100404274
Genes associated with rs572394196[chr6:17907791], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More