EnhancerDB
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  3. rs572394249[chr12:124883694]
Enhancers that have rs572394249[chr12:124883694]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 124862183 124886902 enh2671
Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs572394249[chr12:124883694]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 124883683 124883704 REST JASPAR yes 124374475
chr12 124883684 124883694 ZNF740 JASPAR yes 124374476
chr12 124883685 124883695 GCM2 JASPAR yes 124374477
chr12 124883686 124883699 TFAP2A JASPAR yes 124374478
chr12 124883686 124883699 TFAP2B JASPAR yes 124374479
chr12 124883686 124883699 TFAP2C JASPAR yes 124374480
chr12 124883693 124883704 NFKB1 JASPAR yes 124374481
chr12 124883694 124883698 LFA1 TRANSFAC yes 124374482
chr12 124883694 124883704 NFKB1 JASPAR yes 124374483
Genes associated with rs572394249[chr12:124883694], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More