EnhancerDB
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  3. rs572419698[chr16:28205550]
Enhancers that have rs572419698[chr16:28205550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs572419698[chr16:28205550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28205544 28205559 MEF2C JASPAR yes 10221510
chr16 28205548 28205569 IRF1 JASPAR yes 10221511
chr16 28205549 28205555 TBP TRANSFAC yes 10221512
Genes associated with rs572419698[chr16:28205550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More