EnhancerDB
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  3. rs572438356[chr16:88296083]
Enhancers that have rs572438356[chr16:88296083]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs572438356[chr16:88296083]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88295277 88296238 AR GTRD no Prostate (PC-3) 21735671
chr16 88295493 88296699 ZBTB33 GTRD no Brain (SK-N-SH) 21735672
chr16 88295727 88296326 TCF7L2 GTRD no Colon (HCT116) 21735673
chr16 88296073 88296090 PAX1 JASPAR yes 12271493
chr16 88296073 88296090 PAX9 JASPAR yes 12271494
chr16 88296074 88296088 PAX6 JASPAR yes 12271495
chr16 88296074 88296093 PAX5 JASPAR yes 12271496
chr16 88296080 88296086 YY1 JASPAR yes 12271497
Genes associated with rs572438356[chr16:88296083], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More