EnhancerDB
  1. Home
  2. SNP
  3. rs572440664[chr1:9848933]
Enhancers that have rs572440664[chr1:9848933]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9840492 9854775 enh53
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs572440664[chr1:9848933]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9848922 9848937 FOXP1 JASPAR yes 26678481
chr1 9848923 9848938 FOXP1 JASPAR yes 26678482
chr1 9848924 9848939 FOXP1 JASPAR yes 26678483
chr1 9848924 9848945 IRF1 JASPAR yes 26678484
chr1 9848925 9848940 FOXP1 JASPAR yes 26678485
chr1 9848925 9848946 IRF1 JASPAR yes 26678486
chr1 9848926 9848941 FOXP1 JASPAR yes 26678487
chr1 9848926 9848947 IRF1 JASPAR yes 26678488
chr1 9848927 9848942 FOXP1 JASPAR yes 26678489
chr1 9848927 9848948 IRF1 JASPAR yes 26678490
chr1 9848928 9848943 FOXP1 JASPAR yes 26678491
chr1 9848928 9848949 IRF1 JASPAR yes 26678492
chr1 9848929 9848944 FOXP1 JASPAR yes 26678493
chr1 9848929 9848950 IRF1 JASPAR yes 26678494
chr1 9848930 9848945 FOXP1 JASPAR yes 26678495
chr1 9848930 9848951 IRF1 JASPAR yes 26678496
chr1 9848931 9848946 FOXP1 JASPAR yes 26678497
chr1 9848931 9848952 IRF1 JASPAR yes 26678498
chr1 9848932 9848947 FOXP1 JASPAR yes 26678499
Genes associated with rs572440664[chr1:9848933], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More