EnhancerDB
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Enhancers that have rs572479701[chr1:244462049]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 244459065 244471355 enh12849
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Placenta Thyroid Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs572479701[chr1:244462049]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 244460111 244462337 ZNF143 GTRD no Epithelial (MCF-7) 21405208
chr1 244460159 244462286 ZNF143 GTRD no Epithelial (MCF-7) 21405209
chr1 244460232 244462759 ZNF143 GTRD no Epithelial (MCF-7) 21405212
chr1 244460232 244462759 ZNF143 GTRD no Epithelial (MCF-7) 107888236
chr1 244460601 244462106 ZNF143 GTRD no Epithelial (MCF-7) 21405215
chr1 244460636 244462080 ZNF143 GTRD no Epithelial (MCF-7) 21405216
chr1 244460714 244462186 ZNF143 GTRD no Epithelial (MCF-7) 21405217
chr1 244460776 244462256 ZNF143 GTRD no Epithelial (MCF-7) 21405218
chr1 244460871 244462130 ZNF143 GTRD no Epithelial (MCF-7) 21405220
chr1 244460976 244462064 ZNF143 GTRD no Epithelial (MCF-7) 21405221
chr1 244461047 244462106 ZNF143 GTRD no Epithelial (MCF-7) 21405222
chr1 244461062 244462230 ZNF143 GTRD no Epithelial (MCF-7) 21405223
chr1 244461067 244462142 ZNF143 GTRD no Epithelial (MCF-7) 21405224
chr1 244461071 244462160 ZNF143 GTRD no Epithelial (MCF-7) 21405225
chr1 244461156 244462152 ZNF143 GTRD no Epithelial (MCF-7) 21405230
chr1 244461157 244462134 ZNF143 GTRD no Epithelial (MCF-7) 21405232
chr1 244461417 244462116 ZNF143 GTRD no Epithelial (MCF-7) 21405236
chr1 244462045 244462061 SOX4 JASPAR yes 36725034
Genes associated with rs572479701[chr1:244462049], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More